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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7241723 chr18:70103104 T/G GAGE2D chrX:49207160-49214420:+ 0.62 7.51 7.59E-10 Box Plot
ACC rs7241981 chr18:70106553 C/T GAGE2D chrX:49207160-49214420:+ -0.61 -7.53 7.1E-10 Box Plot
ACC rs724237 chr2:16869319 C/A TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot
ACC rs72649382 chr1:26702376 T/C AADACL4 chr1:12704566-12727097:+ 1.55 12.97 6.37E-18 Box Plot
ACC rs72659036 chr13:105086034 G/T DUPD1 chr10:76797594-76818272:- 0.97 8.11 8.5E-11 Box Plot
ACC rs72659038 chr13:105086078 T/C DUPD1 chr10:76797594-76818272:- 0.97 8.11 8.5E-11 Box Plot
ACC rs72659039 chr13:105086124 C/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs72659040 chr13:105086229 G/A DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs72659044 chr13:105086390 A/G DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs72659046 chr13:105086396 C/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs72659048 chr13:105090921 A/G DUPD1 chr10:76797594-76818272:- 1.18 10.3 3.76E-14 Box Plot
ACC rs72659051 chr13:105095214 C/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs72713817 chr4:180589915 T/C GC chr4:72607410-72669758:- 0.82 7.53 7.04E-10 Box Plot
ACC rs72777978 chr2:16882373 C/G TFDP3 chrX:132350697-132352376:- 1.14 9.23 1.55E-12 Box Plot
ACC rs72826028 chr2:107336878 A/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot